Publications and Projects using Biomolecular Research Facility

SOM Home > Research > Biomolecular Research Facility > Publications and Projects using Biomolecular Research Facility

Publications and Projects using Biomolecular Research Facility

Projects using Biomolecular Research Facility

Cell migration consortium

Project Service used Reference
Measurement of serum phytoestrogens MRM Lu G, Su G, Zhao Y, Johnston WF, Rissman EF, Sherman NE, Lau CL, Ailawadi G, Upchurch G. Dietary Phytoestrogens Inhibit Experimental Aneurysm Formation in Male Mice. Journal of Surgical Research. 2014. 188:326-338.
Aminopeptidase activty in bronchoalveolar fluid
MRM Paige M, Burdick M, Kim S, Cha J, Jeffery E, Sherman NE, Wang K, Shim YM. Role of LTA4 Hydrolase Aminopeptidase in the Pathogenesis of Emphysema. Journal of Immunology. 2014. 192:5059-5068.
Identification of up-regulated proteins in tumor cells protein analysis by mass spectrometry Daniela C. Granato, Mariana R. Zanetti, Rebeca Kawahara, Sami Yokoo, Romênia R. Domingues, Annelize Z. Aragão, Michelle Agostini, Marcelo F. Carazzolle, Ramon O. Vidal, Isadora L. Flores, Johanna Korvala, Nilva K. Cervigne, Alan R. S. Silva, Ricardo D. Coletta, Edgard Graner, Nicholas E. Sherman, Adriana F. Paes Leme Integrated Proteomics Identified Up-Regulated Focal Adhesion-Mediated Proteins in Human Squamous Cell Carcinoma in an Orthotopic Murine Model. PLoS ONE  9(5):e98208, 2014.
Identification of substrates of protein tyrosine phosphatase protein identification by mass spectrometry Linford AS. Jiang NM. Edwards TE. Sherman NE. Van Voorhis WC. Stewart LJ. Myler PJ. Staker BL. Petri WA Jr. Crystal structure and putative substrate identification for the Entamoeba histolytica low molecular weight tyrosine phosphatase. Molecular & Biochemical Parasitology. 193(1):33-44, 2014
Identification of a regulatory phosphorylation site post translational modification identification Pullikuth AK. Ozdemir A. Cardenas D. Bailey E. Sherman NE. Pfister KK. Catling AD. Epidermal growth factor stimulates extracellular-signal regulated kinase phosphorylation of a novel site on cytoplasmic Dynein intermediate chain 2. International Journal of Molecular Sciences. 14(2):3595-620, 2013.
Monitoring stability of peptides in vaccines HPLC and mass spectrometry Chianese-Bullock KA. Lewis ST. Sherman NE. Shannon JD. Slingluff CL Jr. Multi-peptide vaccines vialed as peptide mixtures can be stable reagents for use in peptide-based immune therapies. Vaccine. 27(11):1764-70, 2009
Isolation of a small molecule HPLC Sullivan JT. Jeffery EF. Shannon JD. Ramakrishnan G. Characterization of the siderophore of Francisella tularensis and role of fslA in siderophore production.  Journal of Bacteriology. 188(11):3785-95, 2006 Jun.
Hypothesis on viral entry mechanism Alexander V. Kofmana, Christopher Letson, Evan Dupart, Yongde Bao, William W. Newcomb, David Schiff, Jay Brown, Roger Abounader. The p53–microRNA-34a axis regulates cellular entry receptors for tumor-associated human herpes viruses Medical Hypotheses Volume 81, Issue 1, July 2013, Pages 62–67
Measurement of microRNA levels quantitative reverse transcription PCR Alexander Kofman, Jungeun Kim, So Park, Evan Dupart, Cristopher Letson, Yongde Bao, Kai Ding, Quan Chen, David Schiff, James Larner & Roger Abounader (2013) microRNA-34a promotes DNA damage and mitotic catastrophe, Cell Cycle, 12:22, 3500-3511, DOI: 10.4161/cc.26459
Gene expression during chemotherapy Micro-array gene chip Jones, David R.,  Moskaluk, Christopher A.,  Gillenwater, Heidi H., Petroni, Gina R., Burks, Sandra G., Philips, Jennifer, Rehm, Patrice K.,  Olazagasti, Juan, Kozower, Benjamin D., Bao, Yongde. Phase I Trial of Induction Histone Deacetylase and Proteasome Inhibition Followed by Surgery in Non–Small-Cell Lung Cancer. Journal of Thoracic Oncology 7(11), November 2012, p 1683–1690. DOI: 10.1097/JTO.0b013e318267928d
Identification of a gene involved in regulation of blood glucose levels.
DNA sequencing, micro-array gene chip Jing Li, Zongji Lu, Qian Wang, Zhiguang Su, Yongde Bao, and Weibin Shi. Characterization of Bglu3, a mouse fasting glucose locus, and identification of Apcs as an underlying candidate gene.Physiol Genomics 44: 345–351, 2012. doi:10.1152/physiolgenomics.00087.2011