Research Projects

Research Projects

Hearing loss is America’s leading disability, affecting millions of people of all ages. To develop preventative and restorative clinical approaches, it is crucial to understand how the hearing process works on the cellular and molecular level. Hearing is mediated by sensory hair cells, part of a highly specialized neuroepithelium in the inner ear. The goal of our lab is to unravel the mechanisms that mediate the development, function, and maintenance of hair cells.

Research focus I: Discovery of novel proteins involved in hearing and deafness

The process of hair cell mechanotransduction converts mechanical energy, caused by sound or head acceleration, into electrical signals that can be interpreted by the brain. This process takes place in the sensory hair cell, in a specialized organelle called hair bundle. Roughly a third of all gene mutations causing hearing loss encode proteins that reside in the sensory hair bundle (Raviv et al., 2010 and Identification and characterization of hair bundle proteins is thus expected to facilitate the discovery of novel deafness genes. Our lab uses Proteomics methods to identify novel proteins that are located in the hair bundle, and we follow up the initial discovery by an in depth characterization of protein function, using cell biology, molecular biology, protein biochemistry and mouse genetics. Using this multifaceted approach, we have already identified several genes that are involved in hearing loss (e.g. FSCN2), and we are currently working on several novel proteins with possible roles in hearing and deafness.

Research focus II: Neurodegeneration and protection of sensory hair cells

The mechanosensitive hair cells in the inner ear do not regenerate, meaning they cannot be replaced once irreparably damaged and lost. It is therefore crucial to identify measures to protect and repair damaged hair cells.  Sensory hair cells are sensitive to many different stress factors, both environmental and endogenous to the cell. Hair cell damage can occur due to age, genetic predispositions, noise and drugs such as certain antibiotics and anti-cancer drugs. A major goal of our lab is to understand the molecular mechanisms and pathways that underlie hair cell damage and death, with special emphasis on drug-induced hair cell damage. Using a combination of cell biology, molecular biology, proteomics and transgenic mouse models, we are probing cellular signaling networks for their involvement in the healthy and pathological state of the sensory hair cell, with the goal of identifying novel pathways and therapeutic targets to prevent hearing loss.

Current research projects

1.) Discovery of novel proteins involved in hearing and deafness

Research2Our lab uses a combination of proteomics, protein biochemistry, cell biology and mouse genetics tools  to discover novel components involved in the molecular process of hearing. In short, we 1) sequence proteins in the sensory hair cell using mass spectrometry, 2) compare the proteomics data with genetic data to identify possible deafness genes, 3) characterize the function of these proteins, and 3) generate transgenic mouse models to evaluate the role of these putative deafness genes in vivo. 

Techniques used: Mass spectrometry, cell biology, protein biochemistry, generation of transgenic mouse models

Model organism: Mouse, chicken

2.) How do ototoxic drugs kill hair cells, and how can we prevent it?

Aminoglycosides comprise a highly potent class of antibiotics, but their clinical use is limited due to nephrotoxicity and ototoxicity.  Despite longstanding research efforts, our understanding of the mechanisms underlying aminoglycoside ototoxicity remains limited, and methods for clinical intervention have yet to emerge. We have recently found that the regulation of protein homeostasis in hair cells is severely affected by aminoglycosides. Protein homeostasis is at the center of general cellular homeostasis, and its dysregulation can activate various stress pathways leading to cellular degeneration and death. We are currently exploring the involvement of novel stress pathways in aminoglycoside-induced hair cell degeneration, with special emphasis on the discovery of novel drugs to prevent hair cell degeneration by blocking stress pathways.

Techniques used: Organ explant cultures, in vivo hair cell damage models, cell biology, transgenic mouse models, proteomics.

Model organism: Mouse, chicken

3.) Monitoring protein dynamics in hair cells using microscopy


In this project, we will study the immediate changes that are correlated with oxidative and mechanical stress to hair cells.  Our goal is to visualize the dynamic processes that follow the disruption of the mechanotransduction complex. Of equal interest are the dynamic processes that enable the regeneration of the mechanotransduction complex, possibly involving the redistribution of mechanotransduction proteins.  In order to observe the dynamics of bundle proteins (especially transduction complex components) in response to oxidative and mechanical stress, we will express tagged proteins in hair cells and monitor the movement of these proteins using in vivo fluorescence microscopy. Visualization of cellular and molecular events is a powerful tool, and the introduction of the Green fluorescent protein (GFP) and its variants has enabled us to visualize the action of proteins in their native cellular environment. Introducing and expressing genes of interest into hair cells has been difficult so far. Our approach is to generate transgenic Xenopus frogs that express a GFP-tagged version of our proteins, and to monitor these proteins in isolated frog hair cells.Research4

Techniques used: Xenopus transgenesis, confocal fluorescence microscopy, DNA cloning techniques

Model organisms: Xenopus tropicalis, rat, mouse